Sopen08g025890

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0005327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005327_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g025890
Cluster	HCCA clusters: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00287_0020	kfl00287_0020_v1.1	(at3g54230 : 203.0) Encodes a splicing factor SUA...	0.01	Orthogroups_2024-Update
LOC_Os02g07070	No alias	RNA recognition motif family protein, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000467	G_patch_dom	934	975
IPR000504	RRM_dom	246	306
IPR000504	RRM_dom	407	473

External Links

No external refs found!