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  5. Sopen08g026080

Sopen08g026080


Description : N-terminal region of Chorein, a TM vesicle-mediated sorter


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g026080
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Potri.001G148800 No alias pleckstrin homology (PH) domain-containing protein 0.03 Orthogroups_2024-Update
Solyc08g077490 No alias pleckstrin homology (PH) domain-containing protein (AHRD... 0.1 Orthogroups_2024-Update
Solyc08g077500 No alias Pleckstrin (PH) domain-containing protein isoform 1... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001849 PH_domain 801 908
IPR009291 Vps62 1988 2124
IPR009291 Vps62 2211 2352
IPR009291 Vps62 4158 4277
IPR031646 VPS13_N2 133 373
IPR009543 SHR-BD 3299 3467
IPR031642 VPS13_mid_rpt 560 779
IPR026854 VPS13_N 2 110
No external refs found!