1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen08g026410

Sopen08g026410


Description : Rare lipoprotein A (RlpA)-like double-psi beta-barrel


Gene families : OG_42_0002700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g026410
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G204800 No alias expansin-like B1 0.03 Orthogroups_2024-Update
Glyma.05G065800 No alias expansin-like B1 0.04 Orthogroups_2024-Update
Glyma.11G038300 No alias expansin-like B1 0.03 Orthogroups_2024-Update
LOC_Os07g31390 No alias beta-expansin precursor, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00004398-RA No alias (q850k7|exlb1_orysa : 241.0) Expansin-like B1 precursor... 0.05 Orthogroups_2024-Update
PSME_00004399-RA No alias (at4g17030 : 241.0) Encodes EXLB1 (expansin-like B1), a... 0.03 Orthogroups_2024-Update
PSME_00022360-RA No alias (q850k7|exlb1_orysa : 262.0) Expansin-like B1 precursor... 0.05 Orthogroups_2024-Update
Potri.003G083200 No alias expansin-like B1 0.03 Orthogroups_2024-Update
Potri.003G087000 No alias expansin-like B1 0.03 Orthogroups_2024-Update
Sobic.002G309300.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 154 237
IPR009009 RlpA-like_DPBB 66 141
No external refs found!