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  5. Solyc02g083170

Solyc02g083170


Description : F-box protein (AHRD V3.3 *** G7LA96_MEDTR)


Gene families : OG_42_0001925 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g083170
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At2g17030 No alias F-box protein SKIP23 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBZ2] 0.04 Orthogroups_2024-Update
Brara.F03183.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g005160 No alias F-box family protein (AHRD V3.3 *** B9MX84_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 318 360
IPR001810 F-box_dom 13 47
No external refs found!