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  5. Sopen08g026670

Sopen08g026670


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g026670
Cluster HCCA clusters: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
409196 No alias related to AP2 11 0.02 Orthogroups_2024-Update
A4A49_23010 No alias ethylene-responsive transcription factor 2 0.03 Orthogroups_2024-Update
A4A49_27754 No alias ethylene-responsive transcription factor 1a 0.02 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.03 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.03 Orthogroups_2024-Update
At2g44940 No alias Ethylene-responsive transcription factor ERF034... 0.02 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.03 Orthogroups_2024-Update
At5g13910 No alias LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2] 0.03 Orthogroups_2024-Update
Brara.A00653.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03207.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.I01208.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.J00612.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G020016 No alias ERF domain protein 12 0.06 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Glyma.02G294100 No alias ethylene response factor 7 0.03 Orthogroups_2024-Update
HORVU0Hr1G036300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G089930.5 No alias cutin and suberin biosynthesis transcription factor... 0.05 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39810 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp6g18650.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Orthogroups_2024-Update
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00000850-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.003G050700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G079300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G046600 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Potri.010G163900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.014G025200 No alias related to AP2 1 0.02 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Pp1s105_212V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s187_47V6 No alias dna binding 0.03 Orthogroups_2024-Update
Pp1s195_38V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s199_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s61_230V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G257600.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Seita.3G272600.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G516600.1 No alias subgroup ERF-VII transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G171300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G145000.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.009G238500.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Solyc07g064890 No alias Ethylene Response Factor F.2 0.03 Orthogroups_2024-Update
Solyc08g007230 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g030250 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 137 187
No external refs found!