Sopen08g026680

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g026680
Cluster	HCCA clusters: Cluster_386

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20397	No alias	dehydration-responsive element-binding protein 2d	0.03	Orthogroups_2024-Update
At1g12630	No alias	Ethylene-responsive transcription factor ERF027...	0.02	Orthogroups_2024-Update
At3g61630	No alias	CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2]	0.02	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.02	Orthogroups_2024-Update
At5g51190	No alias	Ethylene-responsive transcription factor ERF105...	0.04	Orthogroups_2024-Update
Bradi4g31040	No alias	related to AP2 2	0.02	Orthogroups_2024-Update
Brara.C04525.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G01933.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.G03526.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.H01576.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
Brara.J00833.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
GRMZM2G068967	No alias	ethylene response factor 7	0.04	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
Glyma.04G062900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.09G147200	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Glyma.10G239300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G274600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G304300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
Glyma.19G142000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46440	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g34730	No alias	ethylene-responsive transcription factor ERF020,...	0.02	Orthogroups_2024-Update
LOC_Os07g12510	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_2040g0010	No alias	(at5g65130 : 90.5) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_463250g0010	No alias	(at5g11590 : 121.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_922309g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00004891-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Potri.001G155700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G201600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.005G219600	No alias	ethylene responsive element binding factor 3	0.02	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.010G072600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Pp1s124_33V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s162_92V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s25_13V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s7_352V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G139200.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G319700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077370	No alias	Ethylene Response Factor C.5	0.04	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Solyc04g054910	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.05	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc11g042560	No alias	Ethylene-responsive transcription factor ERF021 family...	0.03	Orthogroups_2024-Update
Solyc12g009240	No alias	Ethylene-responsive transcription factor ERF017 (AHRD...	0.03	Orthogroups_2024-Update
Solyc12g044390	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Sopen09g032850	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen12g004490	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen12g022660	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	183	233

External Links

No external refs found!

Sopen08g026680

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation