Sopen08g026800

Description : HD-ZIP protein N terminus

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g026800
Cluster	HCCA clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
A4A49_35452	No alias	homeobox-leucine zipper protein hat4	0.02	Orthogroups_2024-Update
Brara.C04552.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.20G014400	No alias	homeobox-leucine zipper protein 17	0.04	Orthogroups_2024-Update
Kfl00202_0020	kfl00202_0020_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os03g12860	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00022003-RA	No alias	(at4g37790 : 231.0) Encodes homeobox protein HAT22,...	0.02	Orthogroups_2024-Update
Potri.009G023600	No alias	homeobox from Arabidopsis thaliana	0.03	Orthogroups_2024-Update
Pp1s203_33V6	No alias	homeobox-leucine zipper protein	0.03	Orthogroups_2024-Update
Pp1s41_32V6	No alias	homeobox-leucine zipper protein	0.03	Orthogroups_2024-Update
Seita.4G245400.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G187800.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G169200.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sopen01g033480	No alias	Homeobox associated leucine zipper	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	185	219
IPR006712	HD-ZIP_N	2	104
IPR001356	Homeobox_dom	129	183

External Links

No external refs found!

Sopen08g026800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation