Sopen08g027030


Description : Matrixin


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g027030
Cluster HCCA clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78530 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Solyc10g018760 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *** B9RD50_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 151 313
IPR002477 Peptidoglycan-bd-like 64 117
No external refs found!