Sopen08g028060

Description : A20-like zinc finger

Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g028060
Cluster	HCCA clusters: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g36050	No alias	A20/AN1-like zinc finger family protein	0.03	Orthogroups_2024-Update
Brara.D00571.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.E02841.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.F00262.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
GRMZM2G083894	No alias	A20/AN1-like zinc finger family protein	0.03	Orthogroups_2024-Update
LOC_Os06g41010	No alias	zinc finger A20 and AN1 domain-containing...	0.03	Orthogroups_2024-Update
Seita.6G203700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000058	Znf_AN1	106	142
IPR002653	Znf_A20	20	43

External Links

No external refs found!