Sopen08g028190

Description : Copper/zinc superoxide dismutase (SODC)

Gene families : OG_42_0006989 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006989_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g028190
Cluster	HCCA clusters: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi5g18900	No alias	copper chaperone for SOD1	0.02	Orthogroups_2024-Update
Brara.H02652.1	No alias	copper chaperone *(CCS)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006801	superoxide metabolic process	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0030001	metal ion transport	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001424	SOD_Cu_Zn_dom	80	177
IPR006121	HMA_dom	2	56

External Links

No external refs found!