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  5. Sopen08g028820

Sopen08g028820


Description : Rhomboid family


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g028820
Cluster HCCA clusters: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
At1g52580 No alias RHOMBOID-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSR0] 0.03 Orthogroups_2024-Update
At1g63120 No alias RHOMBOID-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN1] 0.03 Orthogroups_2024-Update
Brara.I01408.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.13G336700 No alias RHOMBOID-like 1 0.02 Orthogroups_2024-Update
Kfl00353_0040 kfl00353_0040_v1.1 (at2g29050 : 206.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp6g05540.1 No alias protease (RBL) 0.02 Orthogroups_2024-Update
Pp1s84_202V6 No alias membrane protein 0.03 Orthogroups_2024-Update
Pp1s98_70V6 No alias membrane protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 118 260
No external refs found!