Sopen08g029470

Description : Mur ligase middle domain

Gene families : OG_42_0005923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005923_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g029470
Cluster	HCCA clusters: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
148635	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.03	Orthogroups_2024-Update
Bradi3g32820	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.02	Orthogroups_2024-Update
Brara.I01248.1	No alias	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.06	Orthogroups_2024-Update
Cre12.g519900	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.01	Orthogroups_2024-Update
GRMZM2G009070	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.02	Orthogroups_2024-Update
Glyma.08G015200	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.05	Orthogroups_2024-Update
Kfl00635_0050	kfl00635_0050_v1.1	(at1g63680 : 628.0) Encodes AtMurE, a homolog of the...	0.02	Orthogroups_2024-Update
PSME_00032117-RA	No alias	(at1g63680 : 514.0) Encodes AtMurE, a homolog of the...	0.02	Orthogroups_2024-Update
Potri.001G103300	No alias	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.08	Orthogroups_2024-Update
Seita.9G333200.1	No alias	cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)...	0.05	Orthogroups_2024-Update
Solyc08g081170	No alias	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	InterProScan predictions
MF	GO:0016874	ligase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013221	Mur_ligase_cen	350	555
IPR000713	Mur_ligase_N	261	338
IPR004101	Mur_ligase_C	576	659

External Links

No external refs found!