Sopen08g029570

Description : hypothetical protein

Gene families : OG_42_0002238 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002238_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g029570
Cluster	HCCA clusters: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21607	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Bradi2g50590	No alias	Disease resistance protein (TIR-NBS class)	0.02	Orthogroups_2024-Update
GRMZM2G132403	No alias	Disease resistance protein (TIR-NBS class)	0.02	Orthogroups_2024-Update
Kfl00117_0070	kfl00117_0070_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00056770-RA	No alias	(at4g23440 : 851.0) Disease resistance protein (TIR-NBS...	0.02	Orthogroups_2024-Update
PSME_00056879-RA	No alias	(at4g23440 : 741.0) Disease resistance protein (TIR-NBS...	0.03	Orthogroups_2024-Update
Sobic.002G358000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0007165	signal transduction	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	173	252
IPR002182	NB-ARC	465	644

External Links

No external refs found!