Sopen08g029830

Description : MuDR family transposase

Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g029830
Cluster	HCCA clusters: Cluster_389

Target	Alias	Description	ECC score	Gene Family Method
At3g05850	No alias	MUG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VB69]	0.02	Orthogroups_2024-Update
Brara.A03692.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.F02960.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004332	Transposase_MuDR	178	241
IPR000270	PB1_dom	26	93
IPR007527	Znf_SWIM	625	653
IPR018289	MULE_transposase_dom	372	464

External Links

No external refs found!