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  5. Sopen08g030030

Sopen08g030030


Description : Reticulon


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g030030
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
113819 No alias VIRB2-interacting protein 2 0.02 Orthogroups_2024-Update
Bradi2g19230 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Cre16.g689087 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
GRMZM2G031308 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Glyma.16G030700 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G083110.6 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
HORVU7Hr1G075700.2 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
LOC_Os01g12650 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_58851g0010 No alias (at3g10260 : 256.0) Reticulon family protein; CONTAINS... 0.02 Orthogroups_2024-Update
Mp6g03260.1 No alias ER-associated protein (Reticulon) 0.03 Orthogroups_2024-Update
PSME_00019330-RA No alias (at4g11220 : 250.0) VIRB2-interacting protein 2 (BTI2);... 0.03 Orthogroups_2024-Update
PSME_00042713-RA No alias (at3g10915 : 156.0) Reticulon family protein; INVOLVED... 0.04 Orthogroups_2024-Update
Pp1s37_13V6 No alias seed maturation protein 0.02 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.5G013200.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sobic.003G288600.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Solyc08g081730 No alias Reticulon-like protein (AHRD V3.3 *** K4CPG9_SOLLC) 0.04 Orthogroups_2024-Update
Solyc12g006290 No alias Reticulon-like protein (AHRD V3.3 *** M1CT78_SOLTU) 0.02 Orthogroups_2024-Update
evm.model.contig_2198.1 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003388 Reticulon 85 240
No external refs found!