Sopen08g030250


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g030250
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
A4A49_39586 No alias ethylene-responsive transcription factor erf106 0.03 Orthogroups_2024-Update
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.04 Orthogroups_2024-Update
A4A49_56500 No alias ethylene-responsive transcription factor 7 0.03 Orthogroups_2024-Update
Bradi1g23756 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi2g60331 No alias C-repeat/DRE binding factor 1 0.02 Orthogroups_2024-Update
Bradi5g10107 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.C04275.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I00021.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.13G123100 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.18G206600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G071890.2 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G060140.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g54050 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g27930 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g03670 No alias dehydration-responsive element-binding protein,... 0.03 Orthogroups_2024-Update
LOC_Os10g41330 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_26547g0010 No alias (at4g23750 : 91.7) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s265_50V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.2G080100.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Seita.3G368800.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Seita.7G205100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G331300.2 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Solyc06g068360 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc12g005960 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g044390 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Sopen02g035400 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen06g024810 No alias AP2 domain 0.05 Orthogroups_2024-Update
Sopen08g026670 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen10g002080 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 137 186
No external refs found!