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  5. Sopen08g030400

Sopen08g030400


Description : WRKY DNA -binding domain


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g030400
Cluster HCCA clusters: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
A4A49_10325 No alias putative wrky transcription factor 40 0.03 Orthogroups_2024-Update
A4A49_16192 No alias putative wrky transcription factor 29 0.03 Orthogroups_2024-Update
A4A49_27487 No alias putative wrky transcription factor 23 0.02 Orthogroups_2024-Update
Brara.B01884.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D00345.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03852.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G111711 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
GRMZM5G863420 No alias WRKY DNA-binding protein 51 0.02 Orthogroups_2024-Update
Glyma.01G053800 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.18G056600 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
MA_496691g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_93790g0010 No alias (at1g29860 : 110.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00016606-RA No alias (at1g62300 : 138.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
Potri.014G155100 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Seita.5G378000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G202800.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G117400.2 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 78 138
No external refs found!