1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen09g001020

Sopen09g001020


Description : HEAT-like repeat


Gene families : OG_42_0001757 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g001020
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00730 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Kfl00225_0220 kfl00225_0220_v1.1 (at5g53480 : 1067.0) ARM repeat superfamily protein;... 0.04 Orthogroups_2024-Update
LOC_Os05g28510 No alias importin subunit beta, putative, expressed 0.03 Orthogroups_2024-Update
MA_34778g0010 No alias (at5g53480 : 1120.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
Pp1s207_106V6 No alias importin beta- 0.02 Orthogroups_2024-Update
Sobic.009G102900.1 No alias nucleocytoplasmic import karyopherin *(IMB1) 0.03 Orthogroups_2024-Update
Solyc09g005010 No alias Importin subunit beta-1 (AHRD V3.3 *** W9RG70_9ROSA) 0.03 Orthogroups_2024-Update
evm.model.contig_490.5 No alias (at3g08943 : 518.0) ARM repeat superfamily protein;... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
MF GO:0008536 Ran GTPase binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 103
No external refs found!