Sopen09g001140

Description : HECT-domain (ubiquitin-transferase)

Gene families : OG_42_0001767 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001767_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g001140
Cluster	HCCA clusters: Cluster_264

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc12g094560	No alias	E3 ubiquitin-protein ligase-like protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
evm.model.tig00020510.69	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000569	HECT_dom	433	754
IPR000626	Ubiquitin_dom	37	117

External Links

No external refs found!