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  5. Sopen09g001300

Sopen09g001300


Description : Symplekin tight junction protein C terminal


Gene families : OG_42_0002144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g001300
Cluster HCCA clusters: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G121400 No alias HEAT repeat-containing protein 0.02 Orthogroups_2024-Update
PSME_00002892-RA No alias (at5g01400 : 185.0) Encodes a Symplekin/Pta1 homologue... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022075 Symplekin_C 1070 1246
IPR032460 Symplekin/Pta1_N 100 326
No external refs found!