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  5. Sopen09g001400

Sopen09g001400


Description : NAD dependent epimerase/dehydratase family


Gene families : OG_42_0000621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g001400
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G370048 No alias UDP-glucuronic acid decarboxylase 1 0.03 Orthogroups_2024-Update
MA_174294g0010 No alias (at2g28760 : 518.0) UDP-XYL synthase 6 (UXS6); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00022060-RA No alias (at2g28760 : 583.0) UDP-XYL synthase 6 (UXS6); FUNCTIONS... 0.03 Orthogroups_2024-Update
Seita.3G271400.1 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 92 179
IPR001046 NRAMP_fam 25 72
No external refs found!