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  5. Sopen09g001600

Sopen09g001600


Description : PPR repeat family


Gene families : OG_42_0008549 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008549_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g001600
Cluster HCCA clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G006763 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 136 183
IPR002885 Pentatricopeptide_repeat 5 49
IPR002885 Pentatricopeptide_repeat 237 284
IPR002885 Pentatricopeptide_repeat 103 131
No external refs found!