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Description : PPR repeat
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen09g001850 | |
| Cluster | HCCA clusters: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 415185 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| 78092 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 97289 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_07003 | No alias | pentatricopeptide repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
| A4A49_21718 | No alias | pentatricopeptide repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| AC195864.3_FG017 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| At3g15130 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Orthogroups_2024-Update | |
| GRMZM2G111780 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G183900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G057900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G093220.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G080810.1 | No alias | RNA editing factor *(MEF10) | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G079090.7 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G114390.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os03g62690 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g14450 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g49920 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00002375-RA | No alias | (at3g03580 : 696.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005244-RA | No alias | (at3g46790 : 286.0) Encodes a member of a PCMP (plant... | 0.04 | Orthogroups_2024-Update | |
| PSME_00006196-RA | No alias | (at1g11290 : 685.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00011574-RA | No alias | (at1g16480 : 646.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00030185-RA | No alias | (at3g57430 : 680.0) Encodes a chloroplast RNA editing... | 0.06 | Orthogroups_2024-Update | |
| PSME_00034399-RA | No alias | (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
| PSME_00039409-RA | No alias | (at4g18750 : 537.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00042876-RA | No alias | (at3g23330 : 160.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056507-RA | No alias | (at1g16480 : 719.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00057046-RA | No alias | (at4g18750 : 592.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.013G152000 | No alias | mitochondrial editing factor 22 | 0.02 | Orthogroups_2024-Update | |
| Pp1s446_7V6 | No alias | F18A5.40; pentatricopeptide (PPR) repeat-containing... | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G201400.1 | No alias | RNA editing factor *(DOT4) | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G088200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G197400.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Solyc02g069500 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g064750 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |