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  5. Sopen09g002070

Sopen09g002070


Description : PPR repeat family


Gene families : OG_42_0007117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g002070
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bradi1g65860 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00005_0590 kfl00005_0590_v1.1 (at5g02830 : 163.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.9G444700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 575 632
IPR002885 Pentatricopeptide_repeat 522 565
IPR002885 Pentatricopeptide_repeat 291 340
IPR002885 Pentatricopeptide_repeat 370 400
IPR002885 Pentatricopeptide_repeat 402 449
No external refs found!