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Description : Haloacid dehalogenase-like hydrolase
Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Gene families : OG_42_0002384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002384_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen09g002690 | |
| Cluster | HCCA clusters: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03772 | No alias | 29 kda ribonucleoprotein a, chloroplastic | 0.04 | Orthogroups_2024-Update | |
| At2g37220 | No alias | RNA-binding protein CP29B, chloroplastic... | 0.05 | Orthogroups_2024-Update | |
| Bradi1g20440 | No alias | chloroplast RNA-binding protein 29 | 0.05 | Orthogroups_2024-Update | |
| Bradi1g61250 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Orthogroups_2024-Update | |
| Brara.C01867.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.02 | Orthogroups_2024-Update | |
| Brara.E00783.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.03 | Orthogroups_2024-Update | |
| Brara.I03636.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G068715 | No alias | chloroplast RNA-binding protein 29 | 0.04 | Orthogroups_2024-Update | |
| Glyma.10G058500 | No alias | chloroplast RNA-binding protein 29 | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G145200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.06 | Orthogroups_2024-Update | |
| HORVU1Hr1G009390.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G083830.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| LOC_Os07g43810 | No alias | RNA recognition motif containing protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Mp8g03420.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.02 | Orthogroups_2024-Update | |
| Potri.006G127200 | No alias | chloroplast RNA-binding protein 29 | 0.07 | Orthogroups_2024-Update | |
| Potri.016G090700 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s260_6V6 | No alias | 29 kDa ribonucleoprotein A, chloroplast precursor... | 0.02 | Orthogroups_2024-Update | |
| Seita.2G401700.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.03 | Orthogroups_2024-Update | |
| Seita.9G387200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G388600.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.07 | Orthogroups_2024-Update | |
| Sobic.001G357200.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.06 | Orthogroups_2024-Update | |
| Sobic.002G386400.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.03 | Orthogroups_2024-Update | |
| Solyc09g007850 | No alias | RNA binding protein (AHRD V3.3 *** Q39209_ARATH) | 0.11 | Orthogroups_2024-Update | |
| Solyc10g086150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... | 0.11 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |