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  5. Sopen09g002870

Sopen09g002870


Description : ATPase family associated with various cellular activities (AAA)


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g002870
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
PSME_00006623-RA No alias (at5g03340 : 1057.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
Solyc03g112590 No alias cell division cycle 48 (AHRD V3.3 *** AT3G09840.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004201 Cdc48_dom2 132 194
IPR003959 ATPase_AAA_core 518 651
IPR003959 ATPase_AAA_core 245 374
IPR003338 CDC4_N-term_subdom 30 111
No external refs found!