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  5. Sopen09g003920

Sopen09g003920


Description : Alpha amylase, C-terminal all-beta domain


Gene families : OG_42_0001294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g003920
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
At2g36390 No alias SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8] 0.03 Orthogroups_2024-Update
Bradi1g29850 No alias starch branching enzyme 2.2 0.03 Orthogroups_2024-Update
Seita.4G152500.1 No alias starch branching enzyme & EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Sobic.003G213800.2 No alias starch branching enzyme & EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Solyc09g009190 No alias Starch branching enzyme (AHRD V3.3 *** Q9XIS5_PHAVU) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0043169 cation binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 225 308
IPR006047 Glyco_hydro_13_cat_dom 374 445
IPR006048 A-amylase/branching_C 763 857
No external refs found!