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  5. Sopen09g004920

Sopen09g004920


Description : Tetratricopeptide repeat


Gene families : OG_42_0005800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g004920
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G357804 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029489 OGT/SEC/SPY_C 655 846
IPR029489 OGT/SEC/SPY_C 489 638
IPR019734 TPR_repeat 123 148
IPR001440 TPR_1 191 217
IPR001440 TPR_1 402 434
IPR001440 TPR_1 334 367
IPR001440 TPR_1 225 258
No external refs found!