Solyc02g084120


Description : ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *-* W9RJ61_9ROSA)


Gene families : OG_42_0001441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g084120
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Pp1s163_100V6 No alias atp-dependent clp protease atp-binding subunit 0.03 Orthogroups_2024-Update
evm.model.contig_562.2 No alias (at5g53350 : 303.0) CLP protease regulatory subunit CLPX... 0.04 Orthogroups_2024-Update
evm.model.tig00021108.33 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 100 127
No external refs found!