Sopen09g005390


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g005390
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_33562 No alias dof zinc finger protein dof4.6 0.02 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.03 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Brara.B03736.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.07G198900 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G076800.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
Potri.003G034200 No alias DOF zinc finger protein 1 0.02 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 82 138
No external refs found!