Sopen09g006590

Description : RING-variant domain

Gene families : OG_42_0000872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g006590
Cluster	HCCA clusters: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
At2g37950	No alias	At2g37950 [Source:UniProtKB/TrEMBL;Acc:Q5XEN4]	0.04	Orthogroups_2024-Update
Brara.J02634.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU1Hr1G073050.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc09g011770	No alias	RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	107	158

External Links

No external refs found!