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  5. Glyma.01G006800

Glyma.01G006800


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G006800
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_00880 No alias pectinesterase qrt1 0.03 Orthogroups_2024-Update
A4A49_03685 No alias putative pectinesterase 53 0.05 Orthogroups_2024-Update
At1g05310 No alias Probable pectinesterase 8... 0.03 Orthogroups_2024-Update
At1g11590 No alias Probable pectinesterase/pectinesterase inhibitor 19... 0.04 Orthogroups_2024-Update
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.03 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.03 Orthogroups_2024-Update
At3g24130 No alias Probable pectinesterase 29... 0.03 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Kfl00053_0010 kfl00053_0010_v1.1 (at3g29090 : 107.0) Encodes an atypical pectin... 0.03 Orthogroups_2024-Update
LOC_Os07g46190 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G115200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G054700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.3G174200.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.8G237600.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.03 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 87 373
No external refs found!