1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.01G027900

Glyma.01G027900


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G027900
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At1g60590 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Brara.F03263.1 No alias polygalacturonase *(PGX1-like) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.05G005800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Sopen05g001060 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070531 BRCA1-A complex IEP Predicted GO
CC GO:0070552 BRISC complex IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 97 415
No external refs found!