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  5. Glyma.01G029500

Glyma.01G029500


Description : SBP (S-ribonuclease binding protein) family protein


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G029500
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
A4A49_15008 No alias putative boi-related e3 ubiquitin-protein ligase 3 0.03 Orthogroups_2024-Update
Brara.A01067.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Brara.A02483.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F03573.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01163.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G095811 No alias zinc ion binding 0.03 Orthogroups_2024-Update
GRMZM2G314712 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.05G068400 No alias SBP (S-ribonuclease binding protein) family protein 0.05 Orthogroups_2024-Update
Glyma.08G170400 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
PSME_00040898-RA No alias (at1g10650 : 137.0) SBP (S-ribonuclease binding protein)... 0.03 Orthogroups_2024-Update
PSME_00048517-RA No alias (at1g10650 : 181.0) SBP (S-ribonuclease binding protein)... 0.03 Orthogroups_2024-Update
Sobic.004G028800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g078760 No alias CONSTANS interacting protein 4 0.04 Orthogroups_2024-Update
Sopen02g018310 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update
Sopen04g032360 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update
evm.model.tig00000769.9 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!