Glyma.01G049400

Description : cycling DOF factor 3

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.01G049400
Cluster	HCCA clusters: Cluster_287

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04752	No alias	dof zinc finger protein dof3.5	0.02	Orthogroups_2024-Update
A4A49_30381	No alias	dof zinc finger protein pbf	0.05	Orthogroups_2024-Update
A4A49_32286	No alias	cyclic dof factor 2	0.02	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.04	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
At1g51700	No alias	Dof zinc finger protein DOF1.7...	0.03	Orthogroups_2024-Update
At2g28810	No alias	Dof zinc finger protein DOF2.2...	0.04	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.03	Orthogroups_2024-Update
At5g02460	No alias	Dof zinc finger protein DOF5.1...	0.04	Orthogroups_2024-Update
At5g60850	No alias	OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]	0.04	Orthogroups_2024-Update
Bradi1g26570	No alias	TARGET OF MONOPTEROS 6	0.04	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Bradi4g04260	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Brara.C02339.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D01727.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D02286.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H01965.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G146283	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.05	Orthogroups_2024-Update
Glyma.06G124300	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Orthogroups_2024-Update
Glyma.12G072400	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G335200	No alias	OBF-binding protein 3	0.05	Orthogroups_2024-Update
Glyma.13G352000	No alias	DOF zinc finger protein 1	0.03	Orthogroups_2024-Update
Glyma.16G022900	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.07	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os04g58190	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.04	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.03	Orthogroups_2024-Update
PSME_00052342-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.04	Orthogroups_2024-Update
PSME_00053408-RA	No alias	(at5g39660 : 183.0) Dof-type zinc finger...	0.06	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.007G036400	No alias	OBF binding protein 1	0.03	Orthogroups_2024-Update
Potri.009G029500	No alias	OBF-binding protein 3	0.04	Orthogroups_2024-Update
Potri.012G018700	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s199_87V6	No alias	cycling dof factor 2	0.03	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.001G489900.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.009G153400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g062520	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g076030	No alias	Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.05	Orthogroups_2024-Update
Sopen02g022790	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen06g031790	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen06g032440	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	133	190

External Links

No external refs found!

Glyma.01G049400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation