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  5. Glyma.01G056100

Glyma.01G056100


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G056100
Cluster HCCA clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
At1g17010 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Bradi2g60070 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
Brara.E02068.1 No alias oxidoreductase *(LBO) & EC_1.14 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.H01582.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.05 Orthogroups_2024-Update
Glyma.02G125000 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Glyma.13G263800 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G056210.3 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
LOC_Os03g63900 No alias 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed 0.02 Orthogroups_2024-Update
MA_357183g0010 No alias (at3g21420 : 315.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00011571-RA No alias (at3g21420 : 327.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
Potri.001G355200 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 202 299
IPR026992 DIOX_N 46 141
No external refs found!