1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen09g007230

Sopen09g007230


Description : Starch binding domain


Gene families : OG_42_0002318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002318_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g007230
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_41295 No alias phosphoglucan, water dikinase, chloroplastic 0.08 Orthogroups_2024-Update
At5g01260 No alias Carbohydrate-binding-like fold... 0.03 Orthogroups_2024-Update
Bradi2g55380 No alias Carbohydrate-binding-like fold 0.04 Orthogroups_2024-Update
Cre09.g407501 No alias Carbohydrate-binding-like fold 0.03 Orthogroups_2024-Update
Cre12.g551200 No alias Carbohydrate-binding-like fold 0.01 Orthogroups_2024-Update
GRMZM2G074462 No alias Carbohydrate-binding-like fold 0.02 Orthogroups_2024-Update
Glyma.01G115000 No alias Carbohydrate-binding-like fold 0.03 Orthogroups_2024-Update
Glyma.03G062800 No alias Carbohydrate-binding-like fold 0.04 Orthogroups_2024-Update
Glyma.03G063000 No alias Carbohydrate-binding-like fold 0.03 Orthogroups_2024-Update
HORVU3Hr1G084660.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g63810 No alias starch binding domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
Mp1g16100.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Pp1s127_37V6 No alias F7J8.240; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.003G361700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g014400 No alias starch-binding domain-containing protein 0.13 Orthogroups_2024-Update
evm.model.tig00001164.16 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002044 CBM_fam20 84 173
No external refs found!