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  5. Sopen09g007290

Sopen09g007290


Description : Leucine rich repeat


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g007290
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Brara.C00272.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Brara.J02540.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Glyma.08G078900 No alias polygalacturonase inhibiting protein 1 0.02 Orthogroups_2024-Update
Potri.006G058600 No alias polygalacturonase inhibiting protein 1 0.03 Orthogroups_2024-Update
Pp1s59_33V6 No alias disease resistance protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 65
IPR001611 Leu-rich_rpt 174 232
IPR001611 Leu-rich_rpt 149 171
No external refs found!