Glyma.01G121600

Description : hAT transposon superfamily

Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.01G121600
Cluster	HCCA clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
Glyma.09G000200	No alias	hAT transposon superfamily	0.04	Orthogroups_2024-Update
Glyma.20G064800	No alias	hAT transposon superfamily	0.05	Orthogroups_2024-Update
Glyma.20G074600	No alias	hAT transposon superfamily	0.04	Orthogroups_2024-Update
Sopen11g015710	No alias	Protein of unknown function (DUF 659)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007021	DUF659	218	366
IPR003656	Znf_BED	23	57
IPR008906	HATC_C_dom	583	658

External Links

No external refs found!