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  5. Glyma.01G153700

Glyma.01G153700


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0010267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G153700
Cluster HCCA clusters: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
Sobic.003G419800.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc08g075350 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen08g023960 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 460 507
IPR002885 Pentatricopeptide_repeat 357 402
IPR002885 Pentatricopeptide_repeat 766 812
IPR002885 Pentatricopeptide_repeat 129 155
IPR002885 Pentatricopeptide_repeat 259 284
IPR002885 Pentatricopeptide_repeat 231 255
IPR002885 Pentatricopeptide_repeat 670 692
IPR002885 Pentatricopeptide_repeat 435 455
IPR002885 Pentatricopeptide_repeat 568 594
IPR002885 Pentatricopeptide_repeat 740 764
IPR002885 Pentatricopeptide_repeat 332 354
No external refs found!