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  5. Glyma.01G154900

Glyma.01G154900


Description : nine-cis-epoxycarotenoid dioxygenase 4


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G154900
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
Bradi1g58580 No alias nine-cis-epoxycarotenoid dioxygenase 9 0.02 Orthogroups_2024-Update
Bradi4g00335 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.03 Orthogroups_2024-Update
Glyma.05G140900 No alias nine-cis-epoxycarotenoid dioxygenase 5 0.03 Orthogroups_2024-Update
HORVU5Hr1G000320.2 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
HORVU5Hr1G008050.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Kfl00119_0040 kfl00119_0040_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10425950g0010 No alias (at4g19170 : 581.0) chloroplast-targeted member of a... 0.03 Orthogroups_2024-Update
Solyc07g056570 No alias notabilis 0.04 Orthogroups_2024-Update
Sopen07g029920 No alias Retinal pigment epithelial membrane protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 113 579
No external refs found!