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  5. Glyma.01G172800

Glyma.01G172800


Description : NmrA-like negative transcriptional regulator family protein


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G172800
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
414671 No alias pinoresinol reductase 1 0.02 Orthogroups_2024-Update
LOC_Os01g13610 No alias isoflavone reductase homolog IRL, putative, expressed 0.03 Orthogroups_2024-Update
MA_16892g0010 No alias (at1g75280 : 254.0) isoflavone reductase, putative,... 0.04 Orthogroups_2024-Update
MA_180665g0010 No alias (p52578|ifrh_soltu : 241.0) Isoflavone reductase homolog... 0.04 Orthogroups_2024-Update
MA_419572g0010 No alias (at4g39230 : 382.0) encodes a protein whose sequence is... 0.02 Orthogroups_2024-Update
MA_43637g0010 No alias (at4g13660 : 385.0) Encodes a pinoresinol reductase... 0.03 Orthogroups_2024-Update
PSME_00037172-RA No alias (p52579|ifrh_tobac : 248.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
PSME_00045113-RA No alias (at4g39230 : 265.0) encodes a protein whose sequence is... 0.05 Orthogroups_2024-Update
PSME_00049947-RA No alias (at1g32100 : 369.0) Encodes a pinoresinol reductase... 0.03 Orthogroups_2024-Update
Potri.002G034400 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.009G118100 No alias NmrA-like negative transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Seita.4G149100.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Sobic.008G106700.1 No alias pinoresinol/lariciresinol reductase *(PLR) & EC_1.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 7 296
No external refs found!