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  5. Glyma.01G192600

Glyma.01G192600


Description : LOB domain-containing protein 38


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G192600
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
A4A49_37201 No alias lob domain-containing protein 37 0.04 Orthogroups_2024-Update
MA_122595g0010 No alias (at3g49940 : 211.0) LOB domain-containing protein 38... 0.04 Orthogroups_2024-Update
MA_55585g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_8854574g0010 No alias (at1g67100 : 122.0) LOB domain-containing protein 40... 0.03 Orthogroups_2024-Update
PSME_00041119-RA No alias (at5g67420 : 212.0) LOB domain-containing protein 37... 0.06 Orthogroups_2024-Update
Pp1s19_217V6 No alias LOB domain protein 37 [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s41_47V6 No alias lob domain-containing 0.02 Orthogroups_2024-Update
Seita.3G120000.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G169200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G199300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g092550 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!