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  5. Glyma.01G215500

Glyma.01G215500


Description : hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase


Gene families : OG_42_0002432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G215500
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Bradi3g42010 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.02 Orthogroups_2024-Update
Cre16.g678850 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.01 Orthogroups_2024-Update
GRMZM2G106263 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.02 Orthogroups_2024-Update
HORVU4Hr1G085750.12 No alias 3-hydroxy-3-methylglutaryl-CoA synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
MA_101113g0020 No alias (at4g11820 : 568.0) Encodes a protein with... 0.05 Orthogroups_2024-Update
MA_261222g0010 No alias (at4g11820 : 328.0) Encodes a protein with... 0.04 Orthogroups_2024-Update
PSME_00027175-RA No alias (at4g11820 : 573.0) Encodes a protein with... 0.03 Orthogroups_2024-Update
Seita.9G564900.1 No alias 3-hydroxy-3-methylglutaryl-CoA synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Solyc08g080170 No alias Hydroxymethylglutaryl-CoA synthase, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen08g028530 No alias Hydroxymethylglutaryl-coenzyme A synthase C terminal 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA InterProScan predictions
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013746 HMG_CoA_synt_C_dom 175 449
IPR013528 HMG_CoA_synth_N 3 174
No external refs found!