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  5. Glyma.01G221000

Glyma.01G221000


Description : RING/U-box superfamily protein


Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G221000
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Brara.A01345.1 No alias E3 ubiquitin ligase *(AIRP1) 0.03 Orthogroups_2024-Update
Brara.G02490.1 No alias E3 ubiquitin ligase *(AIRP1) 0.03 Orthogroups_2024-Update
GRMZM2G468260 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G016300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s455_5V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 138 182
No external refs found!