Glyma.01G229400


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_42_0004785 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G229400
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cre16.g676400 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Sobic.007G023800.2 No alias RNA helicase *(RCF1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 718 826
IPR011545 DEAD/DEAH_box_helicase_dom 509 680
No external refs found!