Glyma.01G236600

Description : Ribosomal protein S3Ae

Gene families : OG_42_0001814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.01G236600
Cluster	HCCA clusters: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
A4A49_56002	No alias	40s ribosomal protein s3a	0.07	Orthogroups_2024-Update
At3g04840	No alias	40S ribosomal protein S3a-1...	0.05	Orthogroups_2024-Update
Bradi1g71200	No alias	Ribosomal protein S3Ae	0.06	Orthogroups_2024-Update
Bradi1g78170	No alias	Ribosomal protein S3Ae	0.09	Orthogroups_2024-Update
Bradi3g01210	No alias	Ribosomal protein S3Ae	0.07	Orthogroups_2024-Update
Brara.A03750.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.C03077.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.E03419.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.H01188.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Cre13.g568650	No alias	Ribosomal protein S3Ae	0.05	Orthogroups_2024-Update
GRMZM2G145258	No alias	Ribosomal protein S3Ae	0.03	Orthogroups_2024-Update
Glyma.20G149400	No alias	Ribosomal protein S3Ae	0.03	Orthogroups_2024-Update
HORVU4Hr1G070370.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Kfl00143_0140	kfl00143_0140_v1.1	(p33444\|rs3a_catro : 380.0) 40S ribosomal protein S3a...	0.02	Orthogroups_2024-Update
LOC_Os03g10340	No alias	40S ribosomal protein S3a, putative, expressed	0.05	Orthogroups_2024-Update
LOC_Os12g21798	No alias	40S ribosomal protein S3a, putative, expressed	0.03	Orthogroups_2024-Update
Potri.008G156300	No alias	Ribosomal protein S3Ae	0.04	Orthogroups_2024-Update
Pp1s179_15V6	No alias	40s ribosomal protein s3a	0.04	Orthogroups_2024-Update
Pp1s17_306V6	No alias	40s ribosomal protein s3a	0.05	Orthogroups_2024-Update
Pp1s219_50V6	No alias	40s ribosomal protein s3a	0.06	Orthogroups_2024-Update
Seita.2G378300.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Seita.9G502500.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sobic.001G467300.3	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.002G364100.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sobic.002G364500.1	No alias	component *(eS1) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Solyc06g072490	No alias	40S ribosomal protein S3a (AHRD V3.3 *** RS3A_TOBAC)	0.06	Orthogroups_2024-Update
Solyc09g082520	No alias	40S ribosomal protein S3a (AHRD V3.3 *** K4CVM9_SOLLC)	0.07	Orthogroups_2024-Update
Sopen06g028860	No alias	Ribosomal S3Ae family	0.07	Orthogroups_2024-Update
evm.model.contig_2340.2	No alias	(p49397\|rs3a_orysa : 304.0) 40S ribosomal protein S3a...	0.1	Orthogroups_2024-Update
evm.model.tig00020710.39	No alias	(at4g34670 : 313.0) Ribosomal protein S3Ae; FUNCTIONS...	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006177	GMP biosynthetic process	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0046037	GMP metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001593	Ribosomal_S3Ae	16	221

External Links

No external refs found!

Glyma.01G236600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation