Glyma.02G020500

Description : alpha-amylase-like 3

Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G020500
Cluster	HCCA clusters: Cluster_329

Target	Alias	Description	ECC score	Gene Family Method	Actions
Seita.1G331000.1	No alias	alpha amylase	0.05	Orthogroups_2024-Update
Solyc04g082090	No alias	Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
MF	GO:0017048	Rho GTPase binding	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR012850	A-amylase_bs_C	868	926
IPR006047	Glyco_hydro_13_cat_dom	564	848

External Links

No external refs found!

Glyma.02G020500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation