Glyma.02G028600

Description : Matrixin family protein

Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G028600
Cluster	HCCA clusters: Cluster_328

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g59680	No alias	Matrixin family protein	0.04	Orthogroups_2024-Update
Glyma.02G028000	No alias	Matrixin family protein	0.04	Orthogroups_2024-Update
Glyma.19G014200	No alias	Matrixin family protein	0.03	Orthogroups_2024-Update
PSME_00023671-RA	No alias	(at4g16640 : 207.0) Matrixin family protein; FUNCTIONS...	0.04	Orthogroups_2024-Update
Potri.001G340700	No alias	Matrixin family protein	0.03	Orthogroups_2024-Update
Potri.002G142500	No alias	Matrixin family protein	0.02	Orthogroups_2024-Update
Potri.004G190300	No alias	Matrixin family protein	0.05	Orthogroups_2024-Update
Potri.006G240700	No alias	Matrixin family protein	0.02	Orthogroups_2024-Update
Potri.008G027700	No alias	Matrixin family protein	0.03	Orthogroups_2024-Update
Seita.4G105900.1	No alias	M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase...	0.03	Orthogroups_2024-Update
Solyc10g018750	No alias	Metalloendoproteinase 1, putative (AHRD V3.3 - B9RD50_RICCO)	0.04	Orthogroups_2024-Update
Solyc10g018760	No alias	Metalloendoproteinase 1, putative (AHRD V3.3 *** B9RD50_RICCO)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031012	extracellular matrix	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044421	extracellular region part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001818	Pept_M10_metallopeptidase	214	371
IPR002477	Peptidoglycan-bd-like	133	184

External Links

No external refs found!