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  5. Glyma.02G061400

Glyma.02G061400


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G061400
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
At5g10250 No alias Phototropic-responsive NPH3 family protein... 0.03 Orthogroups_2024-Update
Bradi1g09246 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM2G004523 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.11G061200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G011770.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00049027-RA No alias (at1g67900 : 575.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.010G046800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.014G133500 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Seita.6G074900.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Solyc01g105680 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc02g021640 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g030030 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen07g022670 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 251 509
No external refs found!